com.rubecula.darwin.domain.environment
Class Expresser_Direct

java.lang.Object
  com.rubecula.darwin.domain.environment.Expresser_
      com.rubecula.darwin.domain.environment.Expresser_Direct

All Implemented Interfaces:

Expresser

public final class Expresser_Direct
extends Expresser_

This expresser is suitable for haploid genomes. There is a simple one-to-one correspondence between alleles and traits (not dominance, recession, etc.). If you are looking for an expresser for the situation where there is but one allele, with differing values, then consider using the Expresser_Function class.

Author:

Robin Hillyard

Field Summary

Fields inherited from class com.rubecula.darwin.domain.environment.Expresser_

_character, LOG

Constructor Summary

Expresser_Direct(Pharacter character, java.util.Map<java.lang.String,java.lang.String> mapping)

Method Summary

Trait

express(Gene... genes) Express a gene by getting the allele's value and generating a new trait with value derived from the allele's value.

Methods inherited from class com.rubecula.darwin.domain.environment.Expresser_

createTrait, createTrait, createTrait, createTrait, equals, express, getCharacter, getComplement, hashCode, isComplementary

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

Expresser_Direct

public Expresser_Direct(Pharacter character,
                        java.util.Map<java.lang.String,java.lang.String> mapping)

Parameters:

character -

mapping - a map of allele keys to variant keys

Method Detail

express

public Trait express(Gene... genes)

Express a gene by getting the allele's value and generating a new trait with value derived from the allele's value.

Parameters:

genes - a variable number of Gene objects.

Returns:

a trait which is the expression of the given genes

See Also:

Expresser.express(Colony, com.rubecula.darwin.domain.helper.Gene[])