com.rubecula.darwin.domain.world
Class Taxon_Darwinian

java.lang.Object
  net.sf.tostring0.AToString
      com.rubecula.darwin.foundation.Evolvable_
          com.rubecula.darwin.domain.world.Taxon_
              com.rubecula.darwin.domain.world.Taxon_Darwinian

All Implemented Interfaces:

Censusible, HasPhenotypeCache, Registry, Taxon, Evolvable, Generational, Terminal, Theological, net.sf.tostring0.Identifiable, net.sf.tostring0.IToString

public final class Taxon_Darwinian
extends Taxon_

Lifespan: permanent. Default implementation of Taxon.

Version:

$Revision: 1.1 $

Author:

Robin Hillyard

Field Summary

Fields inherited from class com.rubecula.darwin.domain.world.Taxon_

_censusTaker, _genomic, _mortality, _phenome, LOG

Fields inherited from interface net.sf.tostring0.IToString

ANGBR_OPEN, ANGBRA_CLSE, BRA_CLSE, BRA_OPEN, BRCE_OPEN, BRCS_CLSE, COLON, LIST_SEPARATOR, MAX_ELEMENTS_DEFAULT, S_MT, S_PERCENT, SEPARATOR, SPACE

Constructor Summary

Taxon_Darwinian(java.lang.String identifier, Realm realm, Genomic genomic, Phenome phenome, Census censusTaker, double infantMortality, MateChoice chooser, Fecundity fecundity, org.apache.commons.math.random.RandomGenerator random)
Constructor to create a Taxon with no populations, and with the default mortality implementer.

Taxon_Darwinian(java.lang.String identifier, Realm realm, Genomic genomic, Phenome phenome, Census censusTaker, Mortality mortality, MateChoice chooser, Fecundity fecundity)
Constructor to create a Taxon with no populations.

Method Summary

Methods inherited from class com.rubecula.darwin.domain.world.Taxon_

addPopulation, addVisualizableListener, censusMe, cullMembers, doCensus, equals, getCensusibleChildren, getCensusTaker, getChooser, getFecundity, getGenomic, getIdentifier, getMortality, getPhenome, getPhenotypeCache, getPopulation, getPopulations, getProperties, getProperty, getRealm, getSeedPopulation, getVisualizableListeners, hashCode, isFinished, isLastGeneration, nextGeneration, registerBirths, registerDeaths, registerMarriages, seedMembers, setPopulations, setProperties, setProperty, setRegistry, setSeedPopulation, setVisualizableListeners

Methods inherited from class com.rubecula.darwin.foundation.Evolvable_

getGeneration, getMaxGenerations, getResult, setMaxGenerations, setResult

Methods inherited from class net.sf.tostring0.AToString

toString, toString, toStringBrief, toStringId

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Methods inherited from interface com.rubecula.darwin.foundation.Evolvable

getGeneration, getResult

Constructor Detail

Taxon_Darwinian

public Taxon_Darwinian(java.lang.String identifier,
                       Realm realm,
                       Genomic genomic,
                       Phenome phenome,
                       Census censusTaker,
                       double infantMortality,
                       MateChoice chooser,
                       Fecundity fecundity,
                       org.apache.commons.math.random.RandomGenerator random)

Constructor to create a Taxon with no populations, and with the default mortality implementer.

Parameters:

identifier - the identifier for this new system.

realm - the realm to which this system belongs.

genomic - the genomic on which all organisms in all populations of this new system will be based.

phenome - the phenome which all organisms of all populations of this new system will exhibit.

censusTaker - an implementer of Census for the purpose of censusing populations of the new system.

infantMortality - the probability of an infant dying in any of the populations of this new system.

chooser - the mate choice implementation.

fecundity - the fecundity implementation.

random - a random number source.

Taxon_Darwinian

public Taxon_Darwinian(java.lang.String identifier,
                       Realm realm,
                       Genomic genomic,
                       Phenome phenome,
                       Census censusTaker,
                       Mortality mortality,
                       MateChoice chooser,
                       Fecundity fecundity)

Constructor to create a Taxon with no populations.

Parameters:

identifier - the identifier for this new system.

realm - the realm to which this system belongs.

genomic - the genomic on which all organisms in all populations of this new system will be based.

phenome - the phenome which all organisms of all populations of this new system will exhibit.

censusTaker - an implementer of Census for the purpose of censusing populations of the new system.

mortality - the mortality implementation.

chooser - the mate choice implementation.

fecundity - the fecundity implementation.