Uses of Interface
com.rubecula.darwin.domain.helper.EcoFactor

Packages that use EcoFactor

com.rubecula.darwin.domain.environment
com.rubecula.darwin.domain.fitness	Math
com.rubecula.darwin.domain.helper	Darwin
com.rubecula.darwin.examples.pepperedmoth	Peppered Moth Example
com.rubecula.darwin.examples.travelingsalesman	Traveling Salesman Example

Uses of EcoFactor in com.rubecula.darwin.domain.environment

Classes in com.rubecula.darwin.domain.environment that implement EcoFactor

class	EcoFactor_ Abstract class providing base functionality for implementers of EcoFactor.
class	EcoFactor_Humboldtian
class	EcoFactor_Number This abstract implementer of EcoFactor represents an environmental factor with a double value.

Methods in com.rubecula.darwin.domain.environment that return EcoFactor

EcoFactor	ExPhen_.getEcoFactor()
EcoFactor	Environment_.getFactor(java.lang.String name)
protected EcoFactor	ExPhen_.getRevisedFactor() Method to get an updated eco factor for this ExPhen object which will be suitable to substitute in the environment as the outcome of processing this extended phenotype.

Methods in com.rubecula.darwin.domain.environment that return types with arguments of type EcoFactor

java.util.Collection<EcoFactor>

Environment_.getEcoSystem()

Methods in com.rubecula.darwin.domain.environment with parameters of type EcoFactor

java.lang.Object	Environment_.addFactor(EcoFactor factor) Not the favored method of adding an EcoFactor to an Environment.
static ExPhen	ExPhenFactory.makeExtendedPhenotype(java.lang.Class<? extends ExPhen> clazz, EcoFactor factor, java.lang.Object value)
static ExPhen	ExPhenFactory.makeExtendedPhenotype(EcoFactor factor, java.lang.Object value) Consruct a new ExPhen object, of the default class: ExPhen_Castor .
protected void	ExPhen_.postProcess(EcoFactor factor, java.lang.Object value) Method which is called as a post-processor as the final step of ExPhen.applyToEnvironment(Object).
boolean	EcoFactor_Number.update(EcoFactor other)

Method parameters in com.rubecula.darwin.domain.environment with type arguments of type EcoFactor

void	Environment_.setEcoSystem(java.util.Collection<EcoFactor> ecoFactors) Set the ecoFactors for this environment to the collection provided.

Constructors in com.rubecula.darwin.domain.environment with parameters of type EcoFactor

ExPhen_(EcoFactor factor, java.lang.Object value)

ExPhen_Castor(EcoFactor factor, java.lang.Object value)
TEST

Uses of EcoFactor in com.rubecula.darwin.domain.fitness

Methods in com.rubecula.darwin.domain.fitness that return EcoFactor

EcoFactor

Fitness_Hamiltonian.putWeighting(java.lang.String character, EcoFactor factor)

Methods in com.rubecula.darwin.domain.fitness with parameters of type EcoFactor

double	Fitness_Hamiltonian.getFitness(Trait trait, EcoFactor factor)
int	Fitness_Hamiltonian.getWeight(java.lang.String character, EcoFactor factor)
EcoFactor	Fitness_Hamiltonian.putWeighting(java.lang.String character, EcoFactor factor)
void	Fitness_.resetEnvironmentFactor(java.lang.String trait, EcoFactor factor)

Uses of EcoFactor in com.rubecula.darwin.domain.helper

Methods in com.rubecula.darwin.domain.helper that return EcoFactor

EcoFactor	ExPhen.getEcoFactor()
EcoFactor	Environment.getFactor(java.lang.String name) Method to retrieve the eco factor defined by name.

Methods in com.rubecula.darwin.domain.helper that return types with arguments of type EcoFactor

java.util.Collection<EcoFactor>

Environment.getEcoSystem()

Methods in com.rubecula.darwin.domain.helper with parameters of type EcoFactor

java.lang.Object	Environment.addFactor(EcoFactor factor) Add an eco factor to this environment.
double	Fitness.getFitness(Trait trait, EcoFactor factor)
int	Fitness.getWeight(java.lang.String character, EcoFactor factor)
void	Fitness.resetEnvironmentFactor(java.lang.String trait, EcoFactor factor)
boolean	EcoFactor.update(EcoFactor other)

Method parameters in com.rubecula.darwin.domain.helper with type arguments of type EcoFactor

void	Environment.setEcoSystem(java.util.Collection<EcoFactor> ecoFactors) Set the ecoFactors for this environment to the collection provided.

Uses of EcoFactor in com.rubecula.darwin.examples.pepperedmoth

Classes in com.rubecula.darwin.examples.pepperedmoth that implement EcoFactor

class

EcoFactor_SootDensity Class which extends EcoFactor_Number and which is specific to the soot density of the peppered moth example.

Methods in com.rubecula.darwin.examples.pepperedmoth with parameters of type EcoFactor

double	WcSdFitness.getFitness(Trait trait, EcoFactor factor)
int	WcSdFitness.getWeight(java.lang.String character, EcoFactor factor)

Uses of EcoFactor in com.rubecula.darwin.examples.travelingsalesman

Classes in com.rubecula.darwin.examples.travelingsalesman that implement EcoFactor

class	EcoFactor_Clients This eco factor represents the clients that currently need to be visited and their two-dimensional locations.
class	EcoFactor_TravelTimes This eco factor represents the travel times between various clients.
class	EcoFactor_TS

Methods in com.rubecula.darwin.examples.travelingsalesman that return EcoFactor

protected EcoFactor

ExPhen_TS.getRevisedFactor()

Methods in com.rubecula.darwin.examples.travelingsalesman with parameters of type EcoFactor

double	RouteFitness.getFitness(Trait trait, EcoFactor factor) Calculate the fitness for the trait and the factor.
int	RouteFitness.getWeight(java.lang.String character, EcoFactor factor)
protected void	ExPhen_TS.postProcess(EcoFactor factor, java.lang.Object value)
void	RouteFitness.resetEnvironmentFactor(java.lang.String trait, EcoFactor factor)
boolean	EcoFactor_TS.update(EcoFactor other)

Constructors in com.rubecula.darwin.examples.travelingsalesman with parameters of type EcoFactor

ExPhen_TS(EcoFactor factor, java.lang.Object value)