Uses of Interface
com.rubecula.darwin.domain.helper.CacheSignature

Packages that use CacheSignature

com.rubecula.darwin.domain.environment
com.rubecula.darwin.domain.fitness	Math
com.rubecula.darwin.domain.genetics	Genetics
com.rubecula.darwin.domain.helper	Darwin
com.rubecula.darwin.domain.world	Darwin
com.rubecula.darwin.examples.pepperedmoth	Peppered Moth Example
com.rubecula.darwin.examples.travelingsalesman	Traveling Salesman Example

Uses of CacheSignature in com.rubecula.darwin.domain.environment

Classes in com.rubecula.darwin.domain.environment that implement CacheSignature

class	Environment_ Abstract class defining base methods which implement Environment interface.
class	Environment_Susceptible Abstract class for an Environment which is Susceptible to extended-phenotype-invoked changes.
class	Phenotype_ Abstract class to define the base methods and fields for an implementation of Phenotype.
class	Phenotype_Dawkinsian Lifespan: transient.
class	TraitMap_ Abstract class to define base methods and fields for a String-keyed map of Variant objects.
class	TraitMap_ReadOnly

Uses of CacheSignature in com.rubecula.darwin.domain.fitness

Classes in com.rubecula.darwin.domain.fitness that implement CacheSignature

class	FitnessEngine_ Defines the base methods and fields for an implementation of FitnessEngine interface.
class	FitnessEngine_Simple Default implementation of FitnessEngine interface.

Uses of CacheSignature in com.rubecula.darwin.domain.genetics

Classes in com.rubecula.darwin.domain.genetics that implement CacheSignature

class	Allele_ This abstract provides base operations for implementations of Allele, which are specific, competing genes which may appear at a Locus.
class	Allele_Binary Abstract type of allele which has two values, based on a boolean.
class	Allele_Dominance Lifespan: permanent.
class	Allele_Sex Unlike Allele_Dominance, which uses upper and lower case to denote dominance, the two different alleles of the Allele_Sex type are "Y" and "X" for male and female, respectively.
class	Gene_ This abstract class represents a particular gene at a locus of a genome.
class	Gene_Diploid Lifespan: transient.
class	Gene_Haploid Lifespan: transient.
class	Genome_ This abstract class provides base definitions for implementers of Genome, the genetic information contained in an Organism belonging to a Taxon.
class	Genome_Linear Lifespan: transient.
class	Genotype_ This abstract class provides base definitions for implementers of Genome, the genetic information contained in an Organism belonging to a Taxon.

Uses of CacheSignature in com.rubecula.darwin.domain.helper

Subinterfaces of CacheSignature in com.rubecula.darwin.domain.helper

interface	Allele Models the concept of an Allele, that is to say a specific instance of a Genes which "compete" for presence at a Locus
interface	Basic
interface	Environment Defines the concept of an Environment, modeled as a map of EcoFactor objects.
interface	FitnessEngine Registry for fitness functions for Taxon (Evolutionary Computation) Systems.
interface	Gene Defines the operations and properties of a Gene.
interface	Genes This interface represents the read-only aspects of (possibly a subset of) a Genome, although the Ploidy is not included here.
interface	Genome Defines the genetic information contained in an Organism belonging to a Taxon.
interface	Genotype A Genotype is a (diploid or haploid) set of genes which can be manipulated.
interface	Phenotype Defines the methods supported by instances of Phenotype interface.
interface	TraitMap Defines the operations on a read-only collection of Trait instances.

Uses of CacheSignature in com.rubecula.darwin.domain.world

Classes in com.rubecula.darwin.domain.world that implement CacheSignature

class

Environment_Muirian Lifespan: permanent.

Uses of CacheSignature in com.rubecula.darwin.examples.pepperedmoth

Classes in com.rubecula.darwin.examples.pepperedmoth that implement CacheSignature

class	Environment_PepperedMoth This class provides an implementation of the Environment interface for the peppered moth example.
class	FitnessEngine_PepperedMoth Fitness engine for the peppered moth.

Uses of CacheSignature in com.rubecula.darwin.examples.travelingsalesman

Classes in com.rubecula.darwin.examples.travelingsalesman that implement CacheSignature

class	Allele_Number This class is at the heart of the solution to the traveling salesman problem.
class	Environment_TS
class	FitnessEngine_TS
class	Phenotype_TS