com.rubecula.darwin.domain.genetics
Class Chromosome_Sex

java.lang.Object
  net.sf.tostring0.AToString
      com.rubecula.darwin.domain.genetics.Chromosome_
          com.rubecula.darwin.domain.genetics.Chromosome_Sex

All Implemented Interfaces:

Chromosome, Progenitor, SexLinked, net.sf.tostring0.Identifiable, net.sf.tostring0.IToString

public final class Chromosome_Sex
extends Chromosome_

lifespan: permanent. This type implements the Chromosome interface with a sex-linked chromosome.

Author:

Robin Hillyard

Field Summary

Fields inherited from class com.rubecula.darwin.domain.genetics.Chromosome_

LOG

Fields inherited from interface com.rubecula.darwin.domain.helper.Chromosome

SEX

Fields inherited from interface net.sf.tostring0.IToString

ANGBR_OPEN, ANGBRA_CLSE, BRA_CLSE, BRA_OPEN, BRCE_OPEN, BRCS_CLSE, COLON, LIST_SEPARATOR, MAX_ELEMENTS_DEFAULT, S_MT, S_PERCENT, SEPARATOR, SPACE

Constructor Summary

Chromosome_Sex(org.apache.commons.math.random.RandomGenerator random)

Method Summary

protected void	clear() Clear all but the sex locus.
Locus	getSexLocus()

Methods inherited from class com.rubecula.darwin.domain.genetics.Chromosome_

add, add, addAll, addLocus, addLocus, contains, equals, getCount, getGenomic, getIdentifier, getLoci, getLocus, hashCode, indexOf, isEmpty, isSexLinked, lastIndexOf, remove, remove, retainAll, setGenomic, setLoci, toArray, toArray

Methods inherited from class net.sf.tostring0.AToString

toString, toString, toStringBrief, toStringId

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Methods inherited from interface net.sf.tostring0.IToString

toString, toStringBrief, toStringId

Constructor Detail

Chromosome_Sex

public Chromosome_Sex(org.apache.commons.math.random.RandomGenerator random)

Parameters:

random - XXX

Method Detail

getSexLocus

public Locus getSexLocus()

Returns:

the sex locus. XXX consider making this method part of an interface

clear

protected void clear()

Clear all but the sex locus.

Overrides:

clear in class Chromosome_

See Also:

Chromosome_.clear()